Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB004677 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB004677 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | GWHABKB00000010 |
| Cds Coordinates: | 145221684-145232924 |
| Nucleotide length: | 11240 |
| Prodicted protein length: | 538 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | L-aspartase-like | 243 | 538 | GO:0003824 |
| SUPERFAMILY | L-aspartase-like | 1 | 126 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001106 | Pfam | 243 | 359 | Aromatic amino acid lyase |
| IPR001106 | Pfam | 1 | 125 | Aromatic amino acid lyase |
| IPR001106 | PANTHER | 1 | 126 | Aromatic amino acid lyase |
| IPR001106 | PANTHER | 243 | 538 | Aromatic amino acid lyase |
| IPR008948 | SUPERFAMILY | 243 | 538 | L-Aspartase-like |
| IPR023144 | Gene3D | 351 | 472 | Phenylalanine ammonia-lyase, shielding domain superfamily |
| IPR008948 | SUPERFAMILY | 1 | 126 | L-Aspartase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615673 | 96.184 | 891 | 0.0 |
| KY615673 | 96.834 | 379 | 5.04e-177 |
| XM_028214819 | 95.964 | 892 | 0.0 |
| XM_028214819 | 96.834 | 379 | 5.04e-177 |
| MN207174 | 95.852 | 892 | 0.0 |
| MN207174 | 96.834 | 379 | 5.04e-177 |
| MN325703 | 95.122 | 82 | 3.75e-24 |
| XM_028232645 | 97.26 | 73 | 1.35e-23 |
| XM_028232643 | 97.26 | 73 | 1.35e-23 |
| XR_003631888 | 95.946 | 74 | 1.74e-22 |
| AB624184 | 95.714 | 70 | 2.92e-20 |