Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB007447 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB007447 |
Gene Family
FAE1_CUT1_RppA,ACP_syn_III_C,Chal_sti_synt_C
Gene Attributes
| Chromosome: | GWHABKB00000012 |
| Cds Coordinates: | 71106871-71110335 |
| Nucleotide length: | 3464 |
| Prodicted protein length: | 284 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | 3-KETOACYL-COA SYNTHASE | 1 | 259 | GO:0006633|GO:0016020|GO:0016747 |
| Pfam | FAE1/Type III polyketide synthase-like protein | 1 | 152 | GO:0006633|GO:0016020|GO:0016747 |
| Gene3D | - | 1 | 236 | GO:0016746 |
| SUPERFAMILY | Thiolase-like | 85 | 237 | GO:0016746 |
| SUPERFAMILY | Thiolase-like | 1 | 78 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012392 | PANTHER | 1 | 259 | Very-long-chain 3-ketoacyl-CoA synthase |
| IPR013601 | Pfam | 1 | 152 | FAE1/Type III polyketide synthase-like protein |
| IPR016039 | Gene3D | 1 | 236 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 85 | 237 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 1 | 78 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028246859 | 99.507 | 406 | 0.0 |
| XM_028246859 | 99.187 | 369 | 0.0 |
| XM_028246859 | 100 | 54 | 1.18e-16 |
| XM_028268909 | 99.507 | 406 | 0.0 |
| XM_028268909 | 99 | 400 | 0.0 |
| XM_028268908 | 99.507 | 406 | 0.0 |
| XM_028268908 | 99.242 | 396 | 0.0 |