Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB009392 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB009392 |
Gene Family
ACP_syn_III_C,ACP_syn_III
Gene Attributes
| Chromosome: | GWHABKB00000013 |
| Cds Coordinates: | 103662705-103682247 |
| Nucleotide length: | 19542 |
| Prodicted protein length: | 405 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| CDD | KAS_III | 70 | 402 | GO:0004315|GO:0006633 |
| SUPERFAMILY | Thiolase-like | 73 | 404 | GO:0016746 |
| Hamap | 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. | 69 | 404 | GO:0004315|GO:0006633 |
| Gene3D | - | 68 | 405 | GO:0016746 |
| Pfam | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | 174 | 253 | GO:0004315|GO:0006633 |
| TIGRFAM | fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III | 71 | 404 | GO:0004315|GO:0006633 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR004655 | CDD | 70 | 402 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 |
| IPR013747 | Pfam | 315 | 404 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal |
| IPR016039 | SUPERFAMILY | 73 | 404 | Thiolase-like |
| IPR004655 | Hamap | 69 | 404 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 |
| IPR016039 | Gene3D | 68 | 405 | Thiolase-like |
| IPR013751 | Pfam | 174 | 253 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III |
| IPR004655 | TIGRFAM | 71 | 404 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028225117 | 99.097 | 1218 | 0.0 |
| JQ739519 | 98.768 | 1218 | 0.0 |
| XR_003629800 | 95.395 | 152 | 2.67e-59 |
| XR_003629797 | 95.395 | 152 | 2.67e-59 |
| XR_003629796 | 95.395 | 152 | 2.67e-59 |
| XR_003629795 | 95.395 | 152 | 2.67e-59 |
| XR_003629793 | 95.395 | 152 | 2.67e-59 |
| XR_003629792 | 95.395 | 152 | 2.67e-59 |
| XR_003629791 | 95.395 | 152 | 2.67e-59 |
| XR_003629790 | 95.395 | 152 | 2.67e-59 |
| XR_003629789 | 95.395 | 152 | 2.67e-59 |
| XR_003629788 | 95.395 | 152 | 2.67e-59 |
| XR_003629787 | 95.395 | 152 | 2.67e-59 |
| XR_003629786 | 95.395 | 152 | 2.67e-59 |
| XR_003629785 | 95.395 | 152 | 2.67e-59 |
| XR_003629784 | 95.395 | 152 | 2.67e-59 |
| XR_003629783 | 95.395 | 152 | 2.67e-59 |
| XR_003629804 | 95.364 | 151 | 9.60e-59 |
| XR_003629803 | 95.364 | 151 | 9.60e-59 |