Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB010022 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB010022 |
Gene Family
FAE1_CUT1_RppA,ACP_syn_III_C,Chal_sti_synt_C
Gene Attributes
| Chromosome: | GWHABKB00000013 |
| Cds Coordinates: | 145364103-145365639 |
| Nucleotide length: | 1536 |
| Prodicted protein length: | 496 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PIRSF | Very_long_ch_3-ktacl-CoA_syn | 21 | 493 | GO:0006633|GO:0016020|GO:0016747 |
| SUPERFAMILY | Thiolase-like | 311 | 480 | GO:0016746 |
| SUPERFAMILY | Thiolase-like | 88 | 305 | GO:0016746 |
| Gene3D | - | 107 | 481 | GO:0016746 |
| Pfam | FAE1/Type III polyketide synthase-like protein | 94 | 383 | GO:0006633|GO:0016020|GO:0016747 |
| PANTHER | 3-KETOACYL-COA SYNTHASE | 4 | 493 | GO:0006633|GO:0016020|GO:0016747 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012392 | PIRSF | 21 | 493 | Very-long-chain 3-ketoacyl-CoA synthase |
| IPR016039 | SUPERFAMILY | 311 | 480 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 88 | 305 | Thiolase-like |
| IPR013747 | Pfam | 400 | 480 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal |
| IPR016039 | Gene3D | 107 | 481 | Thiolase-like |
| IPR013601 | Pfam | 94 | 383 | FAE1/Type III polyketide synthase-like protein |
| IPR012392 | PANTHER | 4 | 493 | Very-long-chain 3-ketoacyl-CoA synthase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028205661 | 99.665 | 1491 | 0.0 |