Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB010137 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB010137 |
Gene Family
FAE1_CUT1_RppA,ACP_syn_III_C,Chal_sti_synt_C
Gene Attributes
| Chromosome: | GWHABKB00000013 |
| Cds Coordinates: | 152190742-152198170 |
| Nucleotide length: | 7428 |
| Prodicted protein length: | 543 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PIRSF | Very_long_ch_3-ktacl-CoA_syn | 44 | 543 | GO:0006633|GO:0016020|GO:0016747 |
| SUPERFAMILY | Thiolase-like | 114 | 331 | GO:0016746 |
| Pfam | FAE1/Type III polyketide synthase-like protein | 120 | 408 | GO:0006633|GO:0016020|GO:0016747 |
| PANTHER | 3-KETOACYL-COA SYNTHASE | 8 | 541 | GO:0006633|GO:0016020|GO:0016747 |
| SUPERFAMILY | Thiolase-like | 337 | 520 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR013747 | Pfam | 439 | 519 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal |
| IPR012392 | PIRSF | 44 | 543 | Very-long-chain 3-ketoacyl-CoA synthase |
| IPR016039 | SUPERFAMILY | 114 | 331 | Thiolase-like |
| IPR013601 | Pfam | 120 | 408 | FAE1/Type III polyketide synthase-like protein |
| IPR012392 | PANTHER | 8 | 541 | Very-long-chain 3-ketoacyl-CoA synthase |
| IPR016039 | SUPERFAMILY | 337 | 520 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028237315 | 100 | 1632 | 0.0 |
| KY807063 | 98.305 | 59 | 1.77e-17 |