Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB011109 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB011109 |
KEGG Orthology
Gene Family
Epimerase,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_10,NAD_binding_4,NmrA,Polysacc_synt_2
Gene Attributes
| Chromosome: | GWHABKB00000014 |
| Cds Coordinates: | 36790676-36794123 |
| Nucleotide length: | 3447 |
| Prodicted protein length: | 517 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 291 | 477 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 291 | 477 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 288 | 511 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256593 | 97.938 | 679 | 0.0 |
| XR_003646172 | 97.938 | 679 | 0.0 |
| FJ883579 | 97.206 | 680 | 0.0 |
| XM_028260815 | 97.387 | 574 | 0.0 |
| XM_028246621 | 97.403 | 539 | 0.0 |
| XM_028235765 | 99.412 | 170 | 3.33e-79 |
| XR_003638901 | 95.683 | 139 | 4.46e-53 |
| XR_003644571 | 96.774 | 124 | 1.25e-48 |
| XM_028248044 | 95.652 | 46 | 4.76e-08 |
| XM_028215237 | 95.652 | 46 | 4.76e-08 |