Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB014264 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB014264 |
KEGG Orthology
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,GDP_Man_Dehyd,NAD_binding_4,NmrA,adh_short,KR
Gene Attributes
| Chromosome: | GWHABKB00000015 |
| Cds Coordinates: | 66412028-66417451 |
| Nucleotide length: | 5423 |
| Prodicted protein length: | 348 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 14 | 237 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 14 | 237 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 10 | 304 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256593 | 99.693 | 652 | 0.0 |
| XM_028256593 | 100 | 258 | 5.75e-130 |
| XM_028256593 | 95.082 | 61 | 1.88e-15 |
| XR_003646172 | 99.693 | 652 | 0.0 |
| XR_003646172 | 100 | 258 | 5.75e-130 |
| XR_003646172 | 95.082 | 61 | 1.88e-15 |
| FJ883579 | 99.234 | 653 | 0.0 |
| FJ883579 | 99.612 | 258 | 2.67e-128 |
| FJ883579 | 95.082 | 61 | 1.88e-15 |
| XM_028260815 | 99.628 | 537 | 0.0 |
| XM_028260815 | 99.18 | 122 | 1.07e-52 |
| XM_028246621 | 100 | 258 | 5.75e-130 |
| XM_028246621 | 99.617 | 261 | 5.75e-130 |