Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB014494 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB014494 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | GWHABKB00000015 |
| Cds Coordinates: | 79265519-79268958 |
| Nucleotide length: | 3439 |
| Prodicted protein length: | 629 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | L-aspartase-like | 12 | 554 | GO:0003824 |
| TIGRFAM | phe_am_lyase: phenylalanine ammonia-lyase | 206 | 605 | GO:0005737|GO:0006559|GO:0016841 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR008948 | SUPERFAMILY | 12 | 554 | L-Aspartase-like |
| IPR005922 | TIGRFAM | 206 | 605 | Phenylalanine ammonia-lyase |
| IPR001106 | Pfam | 50 | 196 | Aromatic amino acid lyase |
| IPR001106 | Pfam | 206 | 497 | Aromatic amino acid lyase |
| IPR001106 | CDD | 68 | 485 | Aromatic amino acid lyase |
| IPR024083 | Gene3D | 11 | 221 | Fumarase/histidase, N-terminal |
| IPR001106 | PANTHER | 5 | 195 | Aromatic amino acid lyase |
| IPR001106 | PANTHER | 208 | 544 | Aromatic amino acid lyase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207174 | 99.7 | 1001 | 0.0 |
| MN207174 | 98.73 | 630 | 0.0 |
| MN207174 | 100 | 117 | 2.54e-51 |
| MN207174 | 97.297 | 74 | 4.40e-24 |
| MN207174 | 95.745 | 47 | 1.62e-08 |
| XM_028214819 | 99.7 | 1001 | 0.0 |
| XM_028214819 | 99.206 | 630 | 0.0 |
| XM_028214819 | 100 | 117 | 2.54e-51 |
| XM_028214819 | 97.297 | 74 | 4.40e-24 |
| XM_028214819 | 95.745 | 47 | 1.62e-08 |
| KY615673 | 99.5 | 1001 | 0.0 |
| KY615673 | 99.206 | 630 | 0.0 |
| KY615673 | 100 | 117 | 2.54e-51 |
| KY615673 | 97.297 | 74 | 4.40e-24 |
| KY615673 | 95.745 | 47 | 1.62e-08 |