Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB025165 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB025165 |
KEGG Orthology
K08748 K22739 K12743 K12239 K12423 K08749 K15668 K04792 K16095 K13611 K24408 K15018 K15666 K16099 K02364 K12444 K23667 K14469 K15675 K16229 K12442 K04788 K12421 K19102 K16123 K15663 K16119 K03822 K18000 K16126 K16121 K15653 K16228 K15664 K08746 K15395 K15384 K16432 K10526 K01904 K00666 K16129 K14467 K04784 K21191 K16093 K16391 K15655 K16378 K15665 K21059 K24101 K12240 K16375 K23756 K15667 K04789 K16428 K22152 K15394 K15658 K01913 K23665 K22118 K15654 K16124 K12709 K00155 K01897 K15656 K15661 K04780 K15670 K01896 K15659 K15662 K16122 K12427 K19103 K15660 K16131 K16094 K16120 K16416 K12701 K16130 K01043 K21182 K22148 K15646 K15018 K16416 K19103 K15663 K16093 K02364 K23665 K12709 K12444 K15668 K22118 K19102 K16229 K00155 K21059 K22148 K12701 K23667 K16126 K16099 K04784 K12743 K12427 K15660 K15666 K14469 K15384 K15658 K16432 K15662 K15659 K22739 K16391 K15655 K16122 K10526 K01904 K00666 K16119 K16120 K15394 K04788 K16131 K12239 K22152 K24101 K13611 K16095 K16124 K04792 K15654 K16375 K15667 K03822 K12442 K12421 K15665 K16094 K14467 K15664 K16123 K12240 K18000 K01897 K04789 K15656 K15661 K04780 K15670 K16378 K16130 K15653 K16121 K16428 K16129 K15675 K16228 K15395 K01043
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | GWHABKB00000006 |
| Cds Coordinates: | 46462810-46472624 |
| Nucleotide length: | 9814 |
| Prodicted protein length: | 786 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 54 | 420 | AMP-dependent synthetase/ligase |
| IPR025110 | Pfam | 506 | 562 | AMP-binding enzyme, C-terminal domain |
| IPR020845 | ProSitePatterns | 212 | 223 | AMP-binding, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028196719 | 96.63 | 1276 | 0.0 |
| XM_028196719 | 100 | 174 | 6.55e-83 |
| XM_028196719 | 98.99 | 99 | 1.50e-39 |
| KY615679 | 96.238 | 1276 | 0.0 |
| KY615679 | 100 | 174 | 6.55e-83 |
| KY615679 | 98.99 | 99 | 1.50e-39 |
| DQ194356 | 95.536 | 1277 | 0.0 |
| DQ194356 | 100 | 174 | 6.55e-83 |
| DQ194356 | 97.98 | 99 | 6.98e-38 |
| XR_003645807 | 100 | 53 | 1.20e-15 |