Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB029006 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB029006 |
Gene Family
Orn_Arg_deC_N
Gene Attributes
| Chromosome: | GWHABKB00000007 |
| Cds Coordinates: | 176541445-176554497 |
| Nucleotide length: | 13052 |
| Prodicted protein length: | 949 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PRINTS | Arginine decarboxylase signature | 676 | 693 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 802 | 823 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 827 | 852 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 440 | 454 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 524 | 545 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 881 | 902 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 416 | 431 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 498 | 513 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase signature | 548 | 570 | GO:0006527|GO:0008295|GO:0008792 |
| Pfam | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | 441 | 696 | GO:0003824 |
| PRINTS | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature | 591 | 604 | GO:0003824 |
| PRINTS | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature | 686 | 705 | GO:0003824 |
| PRINTS | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature | 472 | 484 | GO:0003824 |
| PRINTS | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature | 448 | 466 | GO:0003824 |
| PRINTS | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature | 881 | 894 | GO:0003824 |
| PANTHER | ARGININE DECARBOXYLASE | 300 | 918 | GO:0006527|GO:0008295|GO:0008792 |
| TIGRFAM | speA: arginine decarboxylase | 347 | 916 | GO:0006527|GO:0008295|GO:0008792 |
| CDD | PLPDE_III_ADC | 407 | 902 | GO:0006527|GO:0008295|GO:0008792 |
| SUPERFAMILY | Alanine racemase C-terminal domain-like | 792 | 906 | GO:0003824 |
| Gene3D | Lyase | 355 | 905 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002985 | PRINTS | 676 | 693 | Arginine decarboxylase |
| IPR002985 | PRINTS | 802 | 823 | Arginine decarboxylase |
| IPR002985 | PRINTS | 827 | 852 | Arginine decarboxylase |
| IPR002985 | PRINTS | 440 | 454 | Arginine decarboxylase |
| IPR002985 | PRINTS | 524 | 545 | Arginine decarboxylase |
| IPR002985 | PRINTS | 881 | 902 | Arginine decarboxylase |
| IPR002985 | PRINTS | 416 | 431 | Arginine decarboxylase |
| IPR002985 | PRINTS | 498 | 513 | Arginine decarboxylase |
| IPR002985 | PRINTS | 548 | 570 | Arginine decarboxylase |
| IPR029066 | SUPERFAMILY | 417 | 698 | PLP-binding barrel |
| IPR022644 | Pfam | 441 | 696 | Orn/DAP/Arg decarboxylase 2, N-terminal |
| IPR000183 | PRINTS | 591 | 604 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 686 | 705 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 472 | 484 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 448 | 466 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 881 | 894 | Ornithine/DAP/Arg decarboxylase |
| IPR002985 | PANTHER | 300 | 918 | Arginine decarboxylase |
| IPR002985 | TIGRFAM | 347 | 916 | Arginine decarboxylase |
| IPR022657 | ProSitePatterns | 629 | 642 | Orn/DAP/Arg decarboxylase 2, conserved site |
| IPR029066 | Gene3D | 417 | 698 | PLP-binding barrel |
| IPR002985 | CDD | 407 | 902 | Arginine decarboxylase |
| IPR022653 | ProSitePatterns | 448 | 466 | Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site |
| IPR009006 | SUPERFAMILY | 792 | 906 | Alanine racemase/group IV decarboxylase, C-terminal |
| IPR009006 | Gene3D | 355 | 905 | Alanine racemase/group IV decarboxylase, C-terminal |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028266866 | 99.238 | 1969 | 0.0 |
| JQ653274 | 99.187 | 1969 | 0.0 |