Data Related Infomation

Camellia sinensis Wild Tea(DASZ)                  GWHPABKB029673                   HZAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   Katanin p80 subunit B1
Locus Name:   GWHPABKB029673

KEGG Orthology

K18643  

Gene Family

Katanin_con80

Gene Attributes

Chromosome:GWHABKB00000008
Cds Coordinates:47473828-47479574
Nucleotide length:5746
Prodicted protein length:195

Gene Ontology Classification

Database Annotation Match Start Match End GO
Pfamcon80 domain of Katanin62105GO:0008017

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
PF13925.749105Katanin p80 subunit B1 1e-5

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR028021Pfam62105Katanin p80 subunit, C-terminal

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02824055796.172352.54e-101
XM_02824055696.172352.54e-101
XM_02824055596.172352.54e-101
XM_02824055496.172352.54e-101
XM_02824055396.172352.54e-101
XM_02824055296.172352.54e-101
XM_02824055196.172352.54e-101
XR_00362941796.1542349.12e-101
XR_00364696896502.88e-11
XR_00362941697.8021822.61e-81
XR_00362941695.833483.73e-10
XR_00363279596.386836.06e-28
XR_00363279598.246577.95e-17
XM_028225484100571.71e-18