Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ000969 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ000969 |
KEGG Orthology
Gene Family
Chalcone
Gene Attributes
| Chromosome: | GWHAZTZ00000001 |
| Cds Coordinates: | 57105944-57105714 |
| Nucleotide length: | 1248 |
| Prodicted protein length: | 415 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Chalcone-flavanone isomerase | 214 | 411 | GO:0016872 |
| SUPERFAMILY | Chalcone isomerase | 210 | 414 | GO:0016872 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016087 | Pfam | 214 | 411 | Chalcone isomerase |
| IPR032675 | Gene3D | 2 | 135 | Leucine-rich repeat domain superfamily |
| IPR016089 | Gene3D | 258 | 411 | Chalcone isomerase, orthogonal bundle domain superfamily |
| IPR036298 | SUPERFAMILY | 210 | 414 | Chalcone isomerase superfamily |
| IPR016088 | Gene3D | 226 | 390 | Chalcone isomerase, 3-layer sandwich |
| IPR044191 | PANTHER | 205 | 415 | Chalcone--flavonone isomerase 3-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028214440.1 | 99.13 | 690 | 0.0 |