Data Related Infomation

Camellia Sinesis var. sinensis cv. Huangdan                  GWHPAZTZ012754                   FAFU release 1 annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPAZTZ012754

KEGG Orthology

K09753  

Gene Family

Epimerase

Gene Attributes

Chromosome:GWHAZTZ00000002
Cds Coordinates:152392880-152392757
Nucleotide length:978
Prodicted protein length:325

Gene Ontology Classification

Database Annotation Match Start Match End GO
PfamNAD dependent epimerase/dehydratase family10247GO:0003824

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
PF01370.226324NAD dependent epimerase/dehydratase family1e-5
PF01370.226324NAD dependent epimerase/dehydratase family1e-5
PF01073.2063243-beta hydroxysteroid dehydrogenase/isomerase family1e-5
PF01073.2063243-beta hydroxysteroid dehydrogenase/isomerase family1e-5
PF16363.66324GDP-mannose 4,6 dehydratase1e-5
PF16363.66324GDP-mannose 4,6 dehydratase1e-5
PF13460.76324NAD(P)H-binding1e-5
PF13460.76324NAD(P)H-binding1e-5
PF07993.136324Male sterility protein1e-5
PF07993.136324Male sterility protein1e-5
PF02719.166324Polysaccharide biosynthesis protein1e-5
PF02719.166324Polysaccharide biosynthesis protein1e-5
PF05368.146324NmrA-like family1e-5
PF05368.146324NmrA-like family1e-5
PF08659.116324KR domain1e-5
PF08659.116324KR domain1e-5
PF00106.266324short chain dehydrogenase1e-5
PF00106.266324short chain dehydrogenase1e-5

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR001509Pfam10247NAD-dependent epimerase/dehydratase
IPR036291SUPERFAMILY1319NAD(P)-binding domain superfamily

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_028216763.199.5919780.0