Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ013420 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ013420 |
KEGG Orthology
Gene Family
Gln-synt_C
Gene Attributes
| Chromosome: | GWHAZTZ00000002 |
| Cds Coordinates: | 192975329-192975165 |
| Nucleotide length: | 2532 |
| Prodicted protein length: | 843 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Glutamine synthetase, N-terminal domain | 407 | 504 | GO:0004356|GO:0006542|GO:0006807 |
| Pfam | Glutamine synthetase N-terminal domain | 407 | 504 | GO:0004356|GO:0006542|GO:0006807 |
| Gene3D | Glutamine synthetase | 406 | 501 | GO:0004356|GO:0006542|GO:0006807 |
| Pfam | Glutamine synthetase, catalytic domain | 506 | 834 | GO:0004356|GO:0006807 |
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 505 | 832 | GO:0003824 |
| SMART | Gln_synt_C_2 | 505 | 761 | GO:0004356|GO:0006807 |
| Pfam | Amidohydrolase | 221 | 381 | GO:0016787 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00120.25 | 1 | 843 | Glutamine synthetase, catalytic domain | 1e-5 |
| PF00120.25 | 1 | 843 | Glutamine synthetase, catalytic domain | 1e-5 |
| PF04909.15 | 1 | 843 | Amidohydrolase | 1e-5 |
| PF04909.15 | 1 | 843 | Amidohydrolase | 1e-5 |
| PF16952.6 | 1 | 843 | Glutamine synthetase N-terminal domain | 1e-5 |
| PF16952.6 | 1 | 843 | Glutamine synthetase N-terminal domain | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR032466 | SUPERFAMILY | 210 | 381 | Metal-dependent hydrolase |
| IPR036651 | SUPERFAMILY | 407 | 504 | Glutamine synthetase, N-terminal domain superfamily |
| IPR008147 | Pfam | 407 | 504 | Glutamine synthetase, beta-Grasp domain |
| IPR036651 | Gene3D | 406 | 501 | Glutamine synthetase, N-terminal domain superfamily |
| IPR008146 | Pfam | 506 | 834 | Glutamine synthetase, catalytic domain |
| IPR014746 | SUPERFAMILY | 505 | 832 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR008146 | SMART | 505 | 761 | Glutamine synthetase, catalytic domain |
| IPR006680 | Pfam | 221 | 381 | Amidohydrolase-related |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028195971.1 | 99.842 | 2532 | 0.0 |