Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ013501 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ013501 |
KEGG Orthology
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | GWHAZTZ00000002 |
| Cds Coordinates: | 197322073-197321688 |
| Nucleotide length: | 2136 |
| Prodicted protein length: | 711 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 193 | 209 | GO:0016841 |
| TIGRFAM | phe_am_lyase: phenylalanine ammonia-lyase | 20 | 701 | GO:0005737|GO:0006559|GO:0016841 |
| SUPERFAMILY | L-aspartase-like | 20 | 711 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00221.20 | 19 | 711 | Aromatic amino acid lyase | 1e-5 |
| PF00221.20 | 19 | 711 | Aromatic amino acid lyase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001106 | Pfam | 58 | 525 | Aromatic amino acid lyase |
| IPR022313 | ProSitePatterns | 193 | 209 | Phenylalanine/histidine ammonia-lyases, active site |
| IPR024083 | Gene3D | 19 | 257 | Fumarase/histidase, N-terminal |
| IPR023144 | Gene3D | 524 | 638 | Phenylalanine ammonia-lyase, shielding domain superfamily |
| IPR001106 | PANTHER | 16 | 711 | Aromatic amino acid lyase |
| IPR001106 | CDD | 56 | 521 | Aromatic amino acid lyase |
| IPR005922 | TIGRFAM | 20 | 701 | Phenylalanine ammonia-lyase |
| IPR008948 | SUPERFAMILY | 20 | 711 | L-Aspartase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207176.1 | 99.766 | 2135 | 0.0 |