Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ021189 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ021189 |
KEGG Orthology
Gene Family
Gln-synt_C
Gene Attributes
| Chromosome: | GWHAZTZ00000005 |
| Cds Coordinates: | 44429654-44429058 |
| Nucleotide length: | 597 |
| Prodicted protein length: | 198 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 10 | 173 | GO:0003824 |
| SMART | Gln_synt_C_2 | 1 | 159 | GO:0004356|GO:0006807 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00120.25 | 11 | 165 | Glutamine synthetase, catalytic domain | 1e-5 |
| PF00120.25 | 11 | 165 | Glutamine synthetase, catalytic domain | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027303 | ProSitePatterns | 45 | 61 | Glutamine synthetase, glycine-rich site |
| IPR014746 | SUPERFAMILY | 10 | 173 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR008146 | SMART | 1 | 159 | Glutamine synthetase, catalytic domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MG778703.1 | 98.472 | 458 | 0.0 |