Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ022454 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ022454 |
KEGG Orthology
Gene Family
ELFV_dehydrog_N
Gene Attributes
| Chromosome: | GWHAZTZ00000005 |
| Cds Coordinates: | 108762496-108762377 |
| Nucleotide length: | 2241 |
| Prodicted protein length: | 746 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SMART | ELFV_dehydrog_3 | 144 | 332 | GO:0006520|GO:0016491 |
| Pfam | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 142 | 263 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 54 | 68 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 175 | 195 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 133 | 155 | GO:0006520|GO:0016491 |
| Pfam | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 3 | 124 | GO:0006520|GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF02812.19 | 1 | 257 | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 1e-5 |
| PF00208.22 | 1 | 257 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 1e-5 |
| PF11861.9 | 1 | 257 | Domain of unknown function (DUF3381) | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR024576 | Pfam | 371 | 444 | Ribosomal RNA methyltransferase Spb1, domain of unknown function DUF3381 |
| IPR036291 | SUPERFAMILY | 142 | 261 | NAD(P)-binding domain superfamily |
| IPR006096 | SMART | 144 | 332 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006096 | Pfam | 142 | 263 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR033524 | ProSitePatterns | 62 | 75 | Leu/Phe/Val dehydrogenases active site |
| IPR006095 | PRINTS | 54 | 68 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 175 | 195 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 133 | 155 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006097 | Pfam | 3 | 124 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028236779.1 | 98.164 | 926 | 0.0 |