Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ022734 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ022734 |
KEGG Orthology
Gene Family
Chalcone
Gene Attributes
| Chromosome: | GWHAZTZ00000005 |
| Cds Coordinates: | 134523199-134523100 |
| Nucleotide length: | 660 |
| Prodicted protein length: | 219 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Chalcone-flavanone isomerase | 10 | 212 | GO:0016872 |
| PANTHER | CHALCONE--FLAVONONE ISOMERASE 1-RELATED | 2 | 217 | GO:0009813|GO:0045430 |
| SUPERFAMILY | Chalcone isomerase | 4 | 214 | GO:0016872 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016087 | Pfam | 10 | 212 | Chalcone isomerase |
| IPR044164 | PANTHER | 2 | 217 | Chalcone--flavonone isomerase |
| IPR016089 | Gene3D | 58 | 212 | Chalcone isomerase, orthogonal bundle domain superfamily |
| IPR036298 | SUPERFAMILY | 4 | 214 | Chalcone isomerase superfamily |
| IPR016088 | Gene3D | 10 | 191 | Chalcone isomerase, 3-layer sandwich |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028263815.1 | 99.242 | 660 | 0.0 |