Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ022912 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ022912 |
KEGG Orthology
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | GWHAZTZ00000005 |
| Cds Coordinates: | 156636729-156635695 |
| Nucleotide length: | 1035 |
| Prodicted protein length: | 344 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| TIGRFAM | phe_am_lyase: phenylalanine ammonia-lyase | 1 | 334 | GO:0005737|GO:0006559|GO:0016841 |
| SUPERFAMILY | L-aspartase-like | 1 | 344 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00221.20 | 2 | 344 | Aromatic amino acid lyase | 1e-5 |
| PF00221.20 | 2 | 344 | Aromatic amino acid lyase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005922 | TIGRFAM | 1 | 334 | Phenylalanine ammonia-lyase |
| IPR008948 | SUPERFAMILY | 1 | 344 | L-Aspartase-like |
| IPR023144 | Gene3D | 157 | 271 | Phenylalanine ammonia-lyase, shielding domain superfamily |
| IPR001106 | Pfam | 2 | 166 | Aromatic amino acid lyase |
| IPR001106 | PANTHER | 1 | 344 | Aromatic amino acid lyase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207177.1 | 99.903 | 1035 | 0.0 |