Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ022913 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ022913 |
KEGG Orthology
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | GWHAZTZ00000005 |
| Cds Coordinates: | 156641512-156641133 |
| Nucleotide length: | 1059 |
| Prodicted protein length: | 352 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | L-aspartase-like | 17 | 336 | GO:0003824 |
| ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 191 | 207 | GO:0016841 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00221.20 | 12 | 335 | Aromatic amino acid lyase | 1e-5 |
| PF00221.20 | 12 | 335 | Aromatic amino acid lyase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001106 | CDD | 53 | 328 | Aromatic amino acid lyase |
| IPR024083 | Gene3D | 16 | 255 | Fumarase/histidase, N-terminal |
| IPR001106 | Pfam | 55 | 327 | Aromatic amino acid lyase |
| IPR008948 | SUPERFAMILY | 17 | 336 | L-Aspartase-like |
| IPR022313 | ProSitePatterns | 191 | 207 | Phenylalanine/histidine ammonia-lyases, active site |
| IPR001106 | PANTHER | 1 | 338 | Aromatic amino acid lyase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207177.1 | 99.906 | 1060 | 0.0 |