Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ030023 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ030023 |
Gene Family
NmrA
Gene Attributes
| Chromosome: | GWHAZTZ00000008 |
| Cds Coordinates: | 33623345-33623136 |
| Nucleotide length: | 816 |
| Prodicted protein length: | 271 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF05368.14 | 14 | 252 | NmrA-like family | 1e-5 |
| PF05368.14 | 14 | 252 | NmrA-like family | 1e-5 |
| PF13460.7 | 14 | 252 | NAD(P)H-binding | 1e-5 |
| PF13460.7 | 14 | 252 | NAD(P)H-binding | 1e-5 |
| PF01370.22 | 14 | 252 | NAD dependent epimerase/dehydratase family | 1e-5 |
| PF01370.22 | 14 | 252 | NAD dependent epimerase/dehydratase family | 1e-5 |
| PF16363.6 | 14 | 252 | GDP-mannose 4,6 dehydratase | 1e-5 |
| PF16363.6 | 14 | 252 | GDP-mannose 4,6 dehydratase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR008030 | Pfam | 15 | 247 | NmrA-like domain |
| IPR036291 | SUPERFAMILY | 13 | 262 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028271404.1 | 99.874 | 796 | 0.0 |