Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ031969 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ031969 |
KEGG Orthology
Gene Family
ELFV_dehydrog
Gene Attributes
| Chromosome: | GWHAZTZ00000008 |
| Cds Coordinates: | 174013281-174013207 |
| Nucleotide length: | 1506 |
| Prodicted protein length: | 501 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| CDD | NAD_bind_1_Glu_DH | 266 | 492 | GO:0016639 |
| SMART | ELFV_dehydrog_3 | 268 | 498 | GO:0006520|GO:0016491 |
| Pfam | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 266 | 498 | GO:0006520|GO:0016491 |
| PIRSF | Glu_DH | 88 | 501 | GO:0016639 |
| Pfam | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 123 | 248 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 178 | 192 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 299 | 319 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 426 | 437 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 257 | 279 | GO:0006520|GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00208.22 | 96 | 499 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 1e-5 |
| PF02812.19 | 96 | 499 | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036291 | SUPERFAMILY | 266 | 499 | NAD(P)-binding domain superfamily |
| IPR033922 | CDD | 266 | 492 | NAD(P) binding domain of glutamate dehydrogenase |
| IPR006096 | SMART | 268 | 498 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006096 | Pfam | 266 | 498 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR033524 | ProSitePatterns | 186 | 199 | Leu/Phe/Val dehydrogenases active site |
| IPR014362 | PIRSF | 88 | 501 | Glutamate dehydrogenase |
| IPR006097 | Pfam | 123 | 248 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
| IPR006095 | PRINTS | 178 | 192 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 299 | 319 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 426 | 437 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 257 | 279 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028254450.1 | 99.923 | 1295 | 0.0 |
| XM_028254450.1 | 95.385 | 130 | 5.63e-47 |