Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ032629 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ032629 |
Gene Family
Chal_sti_synt_N
Gene Attributes
| Chromosome: | GWHAZTZ00000009 |
| Cds Coordinates: | 55441985-55441575 |
| Nucleotide length: | 411 |
| Prodicted protein length: | 136 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Thiolase-like | 1 | 135 | GO:0016746 |
| PANTHER | HYDROXYMETHYLGLUTARYL-COA SYNTHASE | 2 | 136 | GO:0009058|GO:0016747 |
| Gene3D | - | 1 | 136 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00195.20 | 8 | 135 | Chalcone and stilbene synthases, N-terminal domain | 1e-5 |
| PF00195.20 | 8 | 135 | Chalcone and stilbene synthases, N-terminal domain | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016039 | SUPERFAMILY | 1 | 135 | Thiolase-like |
| IPR001099 | Pfam | 5 | 136 | Chalcone/stilbene synthase, N-terminal |
| IPR011141 | PANTHER | 2 | 136 | Polyketide synthase, type III |
| IPR016039 | Gene3D | 1 | 136 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028224715.1 | 98.529 | 408 | 0.0 |