Data Related Infomation

Camellia Sinesis var. sinensis cv. Huangdan                  GWHPAZTZ035662                   FAFU release 1 annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPAZTZ035662

KEGG Orthology

K16351  K08844  K16360  K16358  K08762  K16357  K18807  K07523  

Gene Family

ACBP

Gene Attributes

Chromosome:GWHAZTZ00000010
Cds Coordinates:126265054-126264875
Nucleotide length:1953
Prodicted protein length:650

Gene Ontology Classification

Database Annotation Match Start Match End GO
ProSiteProfilesAcyl-CoA-binding (ACB) domain profile.563648GO:0000062
SUPERFAMILYGlutamine synthetase/guanido kinase453540GO:0003824
PfamAcyl CoA binding protein565643GO:0000062
ProSitePatternsFumarate lyases signature.106115GO:0003824
SUPERFAMILYAcyl-CoA binding protein563644GO:0000062
PfamLeucine rich repeat225284GO:0005515
PRINTSAcyl-coA-binding protein signature581599GO:0000062
PRINTSAcyl-coA-binding protein signature564579GO:0000062
PRINTSAcyl-coA-binding protein signature604619GO:0000062
PRINTSAcyl-coA-binding protein signature625642GO:0000062
CDDACBP563646GO:0000062
SUPERFAMILYL-aspartase-like54163GO:0003824
PfamGlutamine synthetase, catalytic domain454531GO:0004356|GO:0006807

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
PF00887.20518649Acyl CoA binding protein1e-5
PF00887.20518649Acyl CoA binding protein1e-5
PF00120.25518649Glutamine synthetase, catalytic domain1e-5
PF00120.25518649Glutamine synthetase, catalytic domain1e-5
PF00206.21518649Lyase1e-5
PF00206.21518649Lyase1e-5
PF13855.7518649Leucine rich repeat1e-5
PF13855.7518649Leucine rich repeat1e-5
PF12799.8518649Leucine Rich repeats (2 copies)1e-5
PF12799.8518649Leucine Rich repeats (2 copies)1e-5

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR000582ProSiteProfiles563648Acyl-CoA-binding protein, ACBP
IPR014746SUPERFAMILY453540Glutamine synthetase/guanido kinase, catalytic domain
IPR000582Pfam565643Acyl-CoA-binding protein, ACBP
IPR032675Gene3D162369Leucine-rich repeat domain superfamily
IPR020557ProSitePatterns106115Fumarate lyase, conserved site
IPR035984SUPERFAMILY563644Acyl-CoA binding protein superfamily
IPR001611Pfam225284Leucine-rich repeat
IPR022761Pfam44129Fumarate lyase, N-terminal
IPR000582PRINTS581599Acyl-CoA-binding protein, ACBP
IPR000582PRINTS564579Acyl-CoA-binding protein, ACBP
IPR000582PRINTS604619Acyl-CoA-binding protein, ACBP
IPR000582PRINTS625642Acyl-CoA-binding protein, ACBP
IPR014352Gene3D550650FERM/acyl-CoA-binding protein superfamily
IPR000582CDD563646Acyl-CoA-binding protein, ACBP
IPR008948SUPERFAMILY54163L-Aspartase-like
IPR008146Pfam454531Glutamine synthetase, catalytic domain

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_028268024.198.1483242.26e-156