Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ036184 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ036184 |
Gene Family
2OG-FeII_Oxy
Gene Attributes
| Chromosome: | GWHAZTZ00000010 |
| Cds Coordinates: | 151546907-151546541 |
| Nucleotide length: | 987 |
| Prodicted protein length: | 328 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | 2OG-Fe(II) oxygenase superfamily | 173 | 269 | GO:0016491 |
| ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 170 | 269 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF03171.21 | 2 | 316 | 2OG-Fe(II) oxygenase superfamily | 1e-5 |
| PF03171.21 | 2 | 316 | 2OG-Fe(II) oxygenase superfamily | 1e-5 |
| PF14226.7 | 2 | 316 | non-haem dioxygenase in morphine synthesis N-terminal | 1e-5 |
| PF14226.7 | 2 | 316 | non-haem dioxygenase in morphine synthesis N-terminal | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR026992 | Pfam | 36 | 122 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | Pfam | 173 | 269 | Oxoglutarate/iron-dependent dioxygenase |
| IPR027443 | Gene3D | 1 | 308 | Isopenicillin N synthase-like |
| IPR005123 | ProSiteProfiles | 170 | 269 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028231520.1 | 93.691 | 634 | 0.0 |
| XM_028231520.1 | 93.425 | 365 | 1.89e-149 |