Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ037535 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | No Gene Product Found |
Locus Name: | GWHPAZTZ037535 |
KEGG Orthology
Gene Family
Lyase_aromatic
Gene Attributes
Chromosome: | GWHAZTZ00000011 |
Cds Coordinates: | 80511673-80511303 |
Nucleotide length: | 2121 |
Prodicted protein length: | 706 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
TIGRFAM | phe_am_lyase: phenylalanine ammonia-lyase | 17 | 696 | GO:0005737|GO:0006559|GO:0016841 |
ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 188 | 204 | GO:0016841 |
SUPERFAMILY | L-aspartase-like | 17 | 706 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
PF00221.20 | 12 | 706 | Aromatic amino acid lyase | 1e-5 |
PF00221.20 | 12 | 706 | Aromatic amino acid lyase | 1e-5 |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR001106 | Pfam | 55 | 527 | Aromatic amino acid lyase |
IPR001106 | CDD | 53 | 516 | Aromatic amino acid lyase |
IPR001106 | PANTHER | 10 | 706 | Aromatic amino acid lyase |
IPR005922 | TIGRFAM | 17 | 696 | Phenylalanine ammonia-lyase |
IPR022313 | ProSitePatterns | 188 | 204 | Phenylalanine/histidine ammonia-lyases, active site |
IPR023144 | Gene3D | 519 | 633 | Phenylalanine ammonia-lyase, shielding domain superfamily |
IPR024083 | Gene3D | 16 | 252 | Fumarase/histidase, N-terminal |
IPR008948 | SUPERFAMILY | 17 | 706 | L-Aspartase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
MN207173.1 | 99.67 | 2121 | 0.0 |