Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ040161 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ040161 |
KEGG Orthology
Gene Family
ELFV_dehydrog_N
Gene Attributes
| Chromosome: | GWHAZTZ00000012 |
| Cds Coordinates: | 56899487-56899245 |
| Nucleotide length: | 561 |
| Prodicted protein length: | 186 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 109 | 184 | GO:0006520|GO:0016491 |
| Pfam | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 7 | 92 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 21 | 35 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 142 | 162 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 100 | 122 | GO:0006520|GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF02812.19 | 8 | 184 | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 1e-5 |
| PF00208.22 | 8 | 184 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR006096 | Pfam | 109 | 184 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006097 | Pfam | 7 | 92 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
| IPR036291 | SUPERFAMILY | 109 | 183 | NAD(P)-binding domain superfamily |
| IPR033524 | ProSitePatterns | 29 | 42 | Leu/Phe/Val dehydrogenases active site |
| IPR006095 | PRINTS | 21 | 35 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 142 | 162 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 100 | 122 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028260725.1 | 93.738 | 543 | 0.0 |