Data Related Infomation
Camellia Sinesis var. sinensis cv. Huangdan GWHPAZTZ042362 FAFU release 1 annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAZTZ042362 |
Gene Family
AMP-binding
Gene Attributes
| Chromosome: | GWHAZTZ00000013 |
| Cds Coordinates: | 54847998-54847006 |
| Nucleotide length: | 1629 |
| Prodicted protein length: | 542 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00501.29 | 2 | 533 | AMP-binding enzyme | 1e-5 |
| PF00501.29 | 2 | 533 | AMP-binding enzyme | 1e-5 |
| PF13193.7 | 2 | 533 | AMP-binding enzyme C-terminal domain | 1e-5 |
| PF13193.7 | 2 | 533 | AMP-binding enzyme C-terminal domain | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR020845 | ProSitePatterns | 186 | 197 | AMP-binding, conserved site |
| IPR000873 | Pfam | 33 | 442 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 1 | 436 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 451 | 526 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615678.1 | 99.325 | 1629 | 0.0 |