Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB000508 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB000508 |
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHACFB00000001 |
| Cds Coordinates: | 31287849-31293594 |
| Nucleotide length: | 5745 |
| Prodicted protein length: | 356 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042086 | Gene3D | 1 | 337 | Methyltransferase, alpha-helical capping domain |
| IPR029063 | SUPERFAMILY | 1 | 353 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR005299 | PANTHER | 1 | 350 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 38 | 353 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| AB031281 | 99.346 | 1071 | 0.0 |
| XM_028205684 | 99.16 | 1071 | 0.0 |
| AY907710 | 99.066 | 1071 | 0.0 |
| AB207816 | 98.413 | 1071 | 0.0 |
| AB207818 | 98.319 | 1071 | 0.0 |
| XM_028205701 | 96.321 | 1033 | 0.0 |
| XM_028226209 | 95.145 | 1071 | 0.0 |
| XM_028256069 | 96.078 | 51 | 1.50e-11 |
| XM_028205740 | 95.444 | 900 | 0.0 |
| XM_028211977 | 96.748 | 492 | 0.0 |
| HM003356 | 99.517 | 414 | 0.0 |
| JX647691 | 98.305 | 413 | 0.0 |
| JX647691 | 98.857 | 350 | 1.99e-174 |
| JX647691 | 100 | 276 | 5.80e-140 |
| JX647691 | 100 | 51 | 6.92e-15 |
| FJ554589 | 99.734 | 376 | 0.0 |
| JX647695 | 95.977 | 348 | 1.22e-156 |
| JX647695 | 96.739 | 276 | 5.93e-125 |
| XM_028268989 | 98.82 | 339 | 2.59e-168 |
| JX647693 | 96.078 | 51 | 1.50e-11 |
| EF526217 | 96.377 | 276 | 2.76e-123 |
| EF526217 | 96 | 50 | 5.39e-11 |
| JX647690 | 96.377 | 276 | 2.76e-123 |
| JX647690 | 96 | 50 | 5.39e-11 |