Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB002008 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB002008 |
KEGG Orthology
K09754 K15089 K23136 K07408 K11868 K24187 K13083 K15472 K22636 K22640 K22639 K13261 K01773 K07411 K17721 K22634 K15800 K21718 K11813 K11812 K00512 K22096 K10720 K13401 K23139 K00513 K22326 K23180 K23805 K21205 K22995 K22811 K15805 K20564 K15814 K17961 K20563 K20770 K23178 K01832 K23137 K07414 K12696 K20619 K15093 K13406 K23177 K24184 K07422 K13385 K23179 K21716 K16265 K23662 K23810 K15099 K13404 K21995 K18388 K00517 K20544 K20662 K04122 K23807 K24188 K24179 K21692 K22932 K13267 K13260 K20559 K13027 K13389 K13029 K15470 K22740 K12640 K07433 K17728 K17730 K17729 K17691 K09755 K00490 K17690 K20496 K17651 K17692 K17719 K17689 K17712 K22635 K22637 K22638 K20513 K07382 K14937 K21693 K17709 K13226 K20620 K23806 K23814 K21206 K20560 K22365 K20618 K16085 K13387 K20562 K20767 K16084 K21291 K20556 K00487 K13225 K20623 K05280 K20617 K22983 K22691 K21717 K23134 K07410 K21714 K17683 K17718 K13224 K07381 K07418 K16083 K00495 K11818 K12153 K12156 K23494 K13223 K13257 K21715 K14985 K15506 K20561 K23135
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00000001 |
| Cds Coordinates: | 184402631-184406946 |
| Nucleotide length: | 4315 |
| Prodicted protein length: | 498 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
SP(Sec/SPI)
CS pos:19-20.
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002401 | PRINTS | 431 | 441 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 291 | 308 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 395 | 419 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 441 | 464 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 85 | 106 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 354 | 372 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 61 | 80 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 311 | 337 | Cytochrome P450, E-class, group I |
| IPR001128 | Pfam | 34 | 487 | Cytochrome P450 |
| IPR036396 | Gene3D | 21 | 494 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 434 | 443 | Cytochrome P450, conserved site |
| IPR001128 | PRINTS | 432 | 441 | Cytochrome P450 |
| IPR001128 | PRINTS | 302 | 319 | Cytochrome P450 |
| IPR001128 | PRINTS | 355 | 366 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 30 | 492 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028201318 | 99.933 | 1497 | 0.0 |
| XM_025778245 | 95.455 | 44 | 1.65e-07 |
| CP030984 | 95.455 | 44 | 1.65e-07 |
| CP030984 | 97.368 | 38 | 7.66e-06 |
| XM_025770982 | 95.455 | 44 | 1.65e-07 |
| XM_016095302 | 95.455 | 44 | 1.65e-07 |
| XM_016328636 | 95.455 | 44 | 1.65e-07 |
| XM_016597113 | 95.238 | 42 | 2.13e-06 |
| XM_025801450 | 97.368 | 38 | 7.66e-06 |
| XM_016095119 | 97.368 | 38 | 7.66e-06 |