Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB004593 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB004593 |
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHACFB00000011 |
| Cds Coordinates: | 50205569-50207843 |
| Nucleotide length: | 2274 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR023144 | Gene3D | 19 | 138 | Phenylalanine ammonia-lyase, shielding domain superfamily |
| IPR001106 | PANTHER | 1 | 200 | Aromatic amino acid lyase |
| IPR008948 | SUPERFAMILY | 1 | 204 | L-Aspartase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207174 | 99.664 | 596 | 0.0 |
| XM_028214819 | 99.497 | 596 | 0.0 |
| KY615673 | 98.826 | 596 | 0.0 |
| XM_028214818 | 98.693 | 306 | 5.07e-150 |
| XM_028214817 | 98.693 | 306 | 5.07e-150 |
| XM_028214816 | 98.693 | 306 | 5.07e-150 |
| XM_028214815 | 98.693 | 306 | 5.07e-150 |
| XM_028214814 | 98.693 | 306 | 5.07e-150 |
| XM_028214813 | 98.693 | 306 | 5.07e-150 |
| XM_028214812 | 98.693 | 306 | 5.07e-150 |
| XM_028214811 | 98.693 | 306 | 5.07e-150 |
| XM_028214810 | 98.693 | 306 | 5.07e-150 |
| XM_028214809 | 98.693 | 306 | 5.07e-150 |
| XM_028214808 | 98.693 | 306 | 5.07e-150 |
| XM_028214807 | 98.693 | 306 | 5.07e-150 |
| XM_028214806 | 98.693 | 306 | 5.07e-150 |
| XM_028214805 | 98.693 | 306 | 5.07e-150 |
| XM_028214804 | 98.693 | 306 | 5.07e-150 |