Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB004891 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB004891 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,NAD_binding_4,GDP_Man_Dehyd
Gene Attributes
| Chromosome: | GWHACFB00000011 |
| Cds Coordinates: | 64125321-64130730 |
| Nucleotide length: | 5409 |
| Prodicted protein length: | 308 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 38 | 245 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 31 | 273 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028260815 | 99.579 | 712 | 0.0 |
| XM_028256593 | 99.578 | 711 | 0.0 |
| XR_003646172 | 99.578 | 711 | 0.0 |
| FJ883579 | 98.455 | 712 | 0.0 |
| XM_028246621 | 99.309 | 434 | 0.0 |