Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB005042 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB005042 |
KEGG Orthology
K22995 K17858 K20561 K20618 K14937 K18388 K22983 K23136 K23179 K11818 K07414 K00517 K16085 K15470 K22740 K20560 K12696 K09755 K24179 K20662 K11868 K07433 K00490 K17730 K17729 K17728 K17651 K07417 K13027 K23810 K20513 K17691 K15814 K14985 K15805 K20564 K24184 K22639 K17692 K17690 K17689 K24187 K23180 K21714 K23806 K22638 K23135 K20563 K17852 K23814 K20496 K10720 K23805 K07413 K20617 K00487 K07408 K22635 K01773 K17718 K13267 K07422 K17709 K13261 K20619 K23807 K17813 K17719 K17961 K13029 K20556 K00495 K13083 K21995 K13260 K07418 K17712 K17683 K17721 K15089 K23177 K20767 K12153 K11812 K11813 K00513 K23662 K15093 K15506 K22932 K07410 K12156 K21293 K00512 K13401 K16084 K24188 K20562 K05280 K20623 K09754 K22637 K15800 K07411 K15099 K20544 K12640 K21693 K22691 K13225 K13223 K21715 K13224 K15472 K17854 K13385 K07419 K20620 K13404 K21206 K20559 K13226 K22634
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00000011 |
| Cds Coordinates: | 73666534-73671902 |
| Nucleotide length: | 5368 |
| Prodicted protein length: | 505 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR017972 | ProSitePatterns | 440 | 449 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 19 | 499 | Cytochrome P450 superfamily |
| IPR001128 | Pfam | 34 | 495 | Cytochrome P450 |
| IPR001128 | PRINTS | 306 | 323 | Cytochrome P450 |
| IPR001128 | PRINTS | 359 | 370 | Cytochrome P450 |
| IPR001128 | PRINTS | 438 | 447 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 34 | 503 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 447 | 470 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 181 | 199 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 295 | 312 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 86 | 107 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 62 | 81 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 315 | 341 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 358 | 376 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 399 | 423 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 437 | 447 | Cytochrome P450, E-class, group I |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028232571 | 99.934 | 1518 | 0.0 |
| KY615675 | 99.802 | 1518 | 0.0 |
| KP990541 | 99.802 | 1518 | 0.0 |
| AY641731 | 99.148 | 1174 | 0.0 |
| HM003347 | 97.938 | 97 | 5.76e-37 |