Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB005545 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB005545 |
KEGG Orthology
K20767 K15506 K13406 K23806 K12153 K17812 K17961 K11818 K22639 K15800 K22640 K23180 K20770 K07419 K00513 K16265 K00517 K09754 K07409 K21715 K07422 K20785 K20621 K12154 K04122 K23494 K13401 K21718 K21693 K22365 K21716 K15470 K22096 K22740 K24179 K13385 K13260 K00495 K12696 K20662 K12640 K20561 K01773 K07382 K14937 K16083 K07433 K18388 K13405 K13224 K20544 K15805 K13226 K22811 K14985 K22637 K20513 K23136 K13029 K23805 K21714 K20559 K17729 K05280 K13083 K24188 K13389 K17728 K21205 K17730 K00490 K21291 K07408 K09755 K17691 K13027 K22932 K20619 K23135 K20620 K07410 K15099 K23810 K17692 K17690 K17689 K17651 K17718 K17683 K17719 K17709 K20618 K17712 K17721 K13404 K07411 K24187 K17852 K10720 K17856 K23807 K15814 K23814 K20496 K00487 K22326 K22636 K17854 K11812 K22638 K20563 K00512 K11813 K20560 K15093 K20564 K11868 K22634 K13267 K16085 K13261 K23662 K20623 K23134 K07414 K20556 K22983 K23179 K20562 K20617 K22995 K13225 K07381 K21692 K17813 K22094 K21206 K16084 K23137 K23177 K22691 K07418 K12156 K13223 K21717 K24184 K15089 K22635 K13257 K13387 K15472 K21995
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00000011 |
| Cds Coordinates: | 104072096-104078666 |
| Nucleotide length: | 6570 |
| Prodicted protein length: | 510 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | Gene3D | 25 | 500 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 358 | 369 | Cytochrome P450 |
| IPR001128 | PRINTS | 305 | 322 | Cytochrome P450 |
| IPR001128 | PRINTS | 438 | 447 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 440 | 449 | Cytochrome P450, conserved site |
| IPR036396 | SUPERFAMILY | 38 | 502 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 294 | 311 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 437 | 447 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 314 | 340 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 398 | 422 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 89 | 110 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 183 | 201 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 357 | 375 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 65 | 84 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 447 | 470 | Cytochrome P450, E-class, group I |
| IPR001128 | Pfam | 38 | 490 | Cytochrome P450 |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KP347677 | 99.348 | 1533 | 0.0 |
| KY615696 | 99.282 | 1533 | 0.0 |
| AY945842 | 99.282 | 1533 | 0.0 |
| XM_028255056 | 98.765 | 1539 | 0.0 |
| DQ194358 | 98.502 | 1535 | 0.0 |
| KY852429 | 99.863 | 1458 | 0.0 |
| JX898767 | 99.778 | 900 | 0.0 |
| KX792116 | 99.667 | 900 | 0.0 |
| KX792116 | 98.901 | 637 | 0.0 |
| CP025650 | 95.122 | 41 | 7.85e-06 |