Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB005879 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB005879 |
KEGG Orthology
K00495 K13406 K23180 K22635 K20513 K20621 K13260 K15814 K13029 K15472 K16085 K22637 K12153 K23178 K17854 K11868 K16265 K23136 K22326 K10720 K22691 K04122 K12154 K07427 K00513 K07410 K11812 K15800 K21206 K22365 K15506 K12640 K15470 K07414 K18388 K20544 K15805 K17961 K23806 K14985 K22740 K07433 K16084 K23662 K14937 K22096 K11813 K24179 K17728 K20559 K07381 K17730 K13257 K12156 K13389 K21205 K20561 K24184 K09754 K23814 K11818 K16083 K21291 K17729 K20617 K20770 K22983 K01773 K00490 K07418 K20662 K17691 K13405 K13267 K23810 K17690 K22811 K20560 K13404 K07408 K13224 K13226 K00512 K22638 K17651 K17692 K17689 K17712 K17683 K17719 K17718 K17721 K00517 K17709 K07411 K22639 K24187 K20771 K15001 K22094 K23139 K23807 K09755 K20496 K20564 K07382 K23494 K01832 K14984 K13225 K21995 K20618 K13261 K00487 K21692 K13387 K15099 K22636 K07422 K23179 K21718 K22932 K22995 K05280 K13027 K23137 K24188 K20623 K20556 K20562 K13083 K20563 K15093 K23134 K21715 K13401 K07419 K21717 K21716 K13223 K22640 K13385 K22634 K20619 K20767 K23177 K21693 K21714 K23135 K15089 K23805 K12696 K20620
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00000012 |
| Cds Coordinates: | 13089010-13093552 |
| Nucleotide length: | 4542 |
| Prodicted protein length: | 537 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001128 | Pfam | 65 | 520 | Cytochrome P450 |
| IPR002401 | PRINTS | 92 | 111 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 323 | 340 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 386 | 404 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 427 | 451 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 465 | 475 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 208 | 226 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 343 | 369 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 116 | 137 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 475 | 498 | Cytochrome P450, E-class, group I |
| IPR017972 | ProSitePatterns | 468 | 477 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 50 | 533 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 387 | 398 | Cytochrome P450 |
| IPR001128 | PRINTS | 475 | 486 | Cytochrome P450 |
| IPR001128 | PRINTS | 466 | 475 | Cytochrome P450 |
| IPR001128 | PRINTS | 334 | 351 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 65 | 529 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028271868 | 99.195 | 1614 | 0.0 |
| XM_028234269 | 96.821 | 975 | 0.0 |
| XM_028234270 | 96.615 | 975 | 0.0 |
| XM_028242422 | 97.927 | 627 | 0.0 |