Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB006108 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB006108 |
KEGG Orthology
K23180 K15093 K21714 K13387 K23135 K17709 K13029 K13406 K22636 K20561 K00517 K15800 K23136 K17721 K17730 K13224 K00495 K09754 K00490 K17689 K15814 K07411 K17692 K17712 K21693 K24187 K13401 K20620 K07382 K11818 K13257 K22326 K13083 K16084 K05280 K24188 K20562 K16083 K13027 K11813 K20619 K23178 K07381 K13225 K23177 K12156 K20770 K21717 K13226 K23806 K13389 K12696 K23494 K00487 K15099 K23810 K20564 K24184 K20623 K20785 K13261 K22639 K07408 K07418 K11868 K22932 K16265 K11812 K15805 K16085 K20544 K22740 K24179 K18388 K15470 K12640 K15472 K07433 K17728 K20617 K17683 K17651 K20662 K17690 K17718 K22637 K22635 K13385 K22638 K21293 K07422 K23137 K17691 K00512 K23662 K22634 K01773 K21692 K13405 K23805 K22983 K21291 K13223 K20556 K20767 K22640 K21715 K13404 K21206 K17961 K22691 K21718 K20513 K20618 K23179 K15506 K20560 K04122 K20559 K17729 K17719 K09755 K22811 K20563 K23134 K21995 K12153 K21716 K21205 K23814 K13267 K23807 K22365 K13260 K20496 K22995 K15089
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00000012 |
| Cds Coordinates: | 27749596-27819063 |
| Nucleotide length: | 69467 |
| Prodicted protein length: | 506 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001128 | PRINTS | 310 | 327 | Cytochrome P450 |
| IPR001128 | PRINTS | 451 | 462 | Cytochrome P450 |
| IPR001128 | PRINTS | 442 | 451 | Cytochrome P450 |
| IPR001128 | PRINTS | 365 | 376 | Cytochrome P450 |
| IPR036396 | Gene3D | 69 | 502 | Cytochrome P450 superfamily |
| IPR036396 | Gene3D | 1 | 58 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 4 | 13 | Cytochrome P450, conserved site |
| IPR001128 | Pfam | 85 | 225 | Cytochrome P450 |
| IPR001128 | Pfam | 222 | 494 | Cytochrome P450 |
| IPR001128 | Pfam | 1 | 48 | Cytochrome P450 |
| IPR002401 | PRINTS | 364 | 382 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 112 | 131 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 405 | 429 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 451 | 474 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 441 | 451 | Cytochrome P450, E-class, group I |
| IPR036396 | SUPERFAMILY | 1 | 46 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 444 | 453 | Cytochrome P450, conserved site |
| IPR036396 | SUPERFAMILY | 85 | 504 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028202675 | 100 | 859 | 0.0 |
| XM_028202675 | 99.816 | 543 | 0.0 |
| XM_028202675 | 95.902 | 122 | 7.34e-46 |
| XM_028243079 | 97.076 | 855 | 0.0 |
| XM_028243079 | 96.721 | 122 | 1.58e-47 |
| XM_028238310 | 100 | 122 | 3.37e-54 |