Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB006420 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB006420 |
KEGG Orthology
K17718 K08887 K11219 K11217 K13223 K23691 K11818 K13401 K17721 K06068 K23662 K17709 K15506 K05091 K05097 K17534 K05120 K11868 K18050 K05086 K07370 K17692 K12320 K11230 K04426 K05104 K05095 K17511 K05093 K24187 K08862 K23692 K04467 K04417 K07376 K08843 K16084 K05121 K08897 K05106 K13976 K05108 K07363 K05125 K11813 K05122 K18052 K13226 K04527 K01773 K04366 K05087 K05103 K04360 K13420 K00487 K16224 K11812 K13225 K18051 K20559 K15814 K04425 K23135 K23805 K13261 K13986 K06071 K06619 K04447 K05110 K05117 K05112 K12321 K05115 K05033 K05102 K15800 K05090 K05105 K20618 K12322 K05089 K05085 K05109 K19008 K17683 K23810 K15805 K13417 K08840 K17690 K19662 K05098 K19663 K05111 K04418 K08845 K05096 K17689 K05119 K13428 K04423 K21357 K04419 K17712 K17719 K04445 K13416 K05725 K05114 K15472 K00495 K13418 K07411 K12156 K12323 K15089 K08891 K03176 K02677 K05094 K05101 K05124 K05871 K21693 K04422 K22600 K07527 K18952 K05123 K12324 K11218 K05100 K19690 K13224 K05099 K16510
Gene Family
p450,Pkinase,Pkinase_Tyr
Gene Attributes
| Chromosome: | GWHACFB00000012 |
| Cds Coordinates: | 52819563-52823508 |
| Nucleotide length: | 3945 |
| Prodicted protein length: | 548 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000719 | Pfam | 374 | 461 | Protein kinase domain |
| IPR011009 | SUPERFAMILY | 282 | 520 | Protein kinase-like domain superfamily |
| IPR000719 | ProSiteProfiles | 229 | 522 | Protein kinase domain |
| IPR001128 | Pfam | 114 | 236 | Cytochrome P450 |
| IPR001128 | Pfam | 34 | 111 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 32 | 228 | Cytochrome P450 superfamily |
| IPR036396 | Gene3D | 23 | 254 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 86 | 107 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 62 | 81 | Cytochrome P450, E-class, group I |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028226065 | 100 | 396 | 0.0 |
| XM_028232571 | 99.49 | 392 | 0.0 |
| XM_028232571 | 99.125 | 343 | 1.86e-171 |
| KY615675 | 99.49 | 392 | 0.0 |
| KY615675 | 98.834 | 343 | 8.65e-170 |
| KP990541 | 99.49 | 392 | 0.0 |
| KP990541 | 98.834 | 343 | 8.65e-170 |
| AY641731 | 97.98 | 396 | 0.0 |
| XM_028226064 | 100 | 240 | 9.29e-120 |
| XM_028261248 | 97.917 | 48 | 2.33e-11 |