Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB008361 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB008361 |
KEGG Orthology
Gene Family
Chalcone
Gene Attributes
| Chromosome: | GWHACFB00000013 |
| Cds Coordinates: | 111771168-111774072 |
| Nucleotide length: | 2904 |
| Prodicted protein length: | 139 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016087 | Pfam | 37 | 139 | Chalcone isomerase |
| IPR036298 | SUPERFAMILY | 36 | 139 | Chalcone isomerase superfamily |
| IPR016088 | Gene3D | 14 | 94 | Chalcone isomerase, 3-layer sandwich |
| IPR016088 | Gene3D | 106 | 139 | Chalcone isomerase, 3-layer sandwich |
| IPR044164 | PANTHER | 37 | 139 | Chalcone--flavonone isomerase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028263816 | 99.349 | 307 | 2.73e-154 |
| XM_028263815 | 99.349 | 307 | 2.73e-154 |