Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB009107 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB009107 |
KEGG Orthology
K00495 K20559 K23814 K15814 K00517 K01832 K20617 K13387 K05280 K15805 K23136 K16085 K22640 K20785 K13395 K24184 K15089 K16084 K11813 K07414 K23662 K11812 K21293 K14937 K21693 K13401 K23178 K24179 K00512 K21715 K20544 K22995 K15800 K22740 K18388 K07410 K20662 K17728 K13267 K13083 K09755 K20563 K12640 K07433 K12153 K15472 K22811 K13405 K20621 K17729 K15470 K22096 K13257 K17730 K16083 K07408 K15093 K23180 K07418 K21205 K20623 K20562 K13406 K17961 K07382 K00490 K15099 K23810 K13404 K11868 K17691 K11818 K17690 K17718 K13027 K13389 K21718 K17709 K22094 K20496 K20767 K22639 K23134 K14985 K24188 K09754 K17651 K17689 K17719 K17692 K17712 K17683 K17721 K07411 K13261 K24187 K13391 K01773 K23139 K07409 K14984 K22093 K17812 K22637 K22638 K20564 K22636 K04122 K20560 K22326 K00513 K21692 K21714 K23806 K20561 K23494 K21206 K00487 K23179 K12156 K22634 K13385 K23807 K13029 K21291 K22691 K07422 K23137 K20618 K22983 K22635 K20513 K20556 K13223 K21716 K23805 K20620 K10720 K12154 K13226 K22365 K16265 K20770 K23177 K22932 K13260 K12696 K13225 K21717 K13224 K23135 K07381 K20619 K21995 K15506
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00000014 |
| Cds Coordinates: | 48635816-48670935 |
| Nucleotide length: | 35119 |
| Prodicted protein length: | 543 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | Gene3D | 69 | 540 | Cytochrome P450 superfamily |
| IPR036396 | Gene3D | 1 | 68 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 400 | 411 | Cytochrome P450 |
| IPR001128 | PRINTS | 486 | 497 | Cytochrome P450 |
| IPR001128 | PRINTS | 347 | 364 | Cytochrome P450 |
| IPR001128 | PRINTS | 477 | 486 | Cytochrome P450 |
| IPR001128 | Pfam | 77 | 534 | Cytochrome P450 |
| IPR001128 | Pfam | 1 | 69 | Cytochrome P450 |
| IPR002401 | PRINTS | 336 | 353 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 399 | 417 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 440 | 464 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 486 | 509 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 356 | 382 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 476 | 486 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 104 | 123 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 128 | 149 | Cytochrome P450, E-class, group I |
| IPR017972 | ProSitePatterns | 479 | 488 | Cytochrome P450, conserved site |
| IPR036396 | SUPERFAMILY | 2 | 69 | Cytochrome P450 superfamily |
| IPR036396 | SUPERFAMILY | 71 | 540 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028208674 | 100 | 1426 | 0.0 |
| XM_028238866 | 95.013 | 381 | 1.86e-166 |
| XM_028238866 | 95.956 | 272 | 3.31e-119 |
| XM_028239476 | 95.146 | 206 | 1.25e-83 |
| XM_028239467 | 95.146 | 206 | 1.25e-83 |
| XM_028239458 | 95.146 | 206 | 1.25e-83 |
| XM_028239454 | 95.146 | 206 | 1.25e-83 |