Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB010527 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB010527 |
KEGG Orthology
K20423 K16120 K16123 K15667 K15656 K22133 K15661 K16876 K04789 K20034 K14760 K15664 K16391 K15666 K04787 K16375 K16101 K14469 K22739 K16378 K16129 K16093 K24101 K21792 K14467 K08295 K04788 K12240 K21059 K15668 K16130 K16432 K23665 K16098 K00155 K19103 K15675 K15662 K16131 K16095 K16094 K04783 K15868 K16122 K12444 K16416 K10526 K01904 K01897 K15018 K04784 K16229 K18660 K01895 K16228 K02364 K01896 K01911 K12743 K23667 K18662 K12424 K05939 K04105 K22149 K02363 K05914 K23617 K12442 K12425 K15658 K16126 K15660 K15654 K04780 K22118 K18000 K16119 K03367 K04792 K15655 K12238 K15665 K15670 K12421 K00666 K12237 K15384 K18661 K04116 K12507 K02182 K18687 K15395 K16099 K03822 K12427 K22148 K12701 K15653 K16124 K12709 K15663 K12239 K15394 K19102 K16121 K22152 K16428 K16430 K01043 K13611 K15659
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | GWHACFB00000015 |
| Cds Coordinates: | 76977533-76985469 |
| Nucleotide length: | 7936 |
| Prodicted protein length: | 542 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 33 | 442 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 1 | 436 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 451 | 526 | AMP-binding enzyme, C-terminal domain |
| IPR020845 | ProSitePatterns | 186 | 197 | AMP-binding, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615678 | 99.632 | 1629 | 0.0 |
| XM_028215194 | 99.854 | 1369 | 0.0 |
| XM_028215194 | 99.522 | 209 | 2.63e-100 |
| XM_028251405 | 98.427 | 445 | 0.0 |