Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB012013 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB012013 |
KEGG Orthology
Gene Family
AMP-binding
Gene Attributes
| Chromosome: | GWHACFB00000002 |
| Cds Coordinates: | 111049619-111072024 |
| Nucleotide length: | 22405 |
| Prodicted protein length: | 205 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 86 | 204 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 74 | 205 | AMP-dependent synthetase-like superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615678 | 96.011 | 351 | 8.90e-156 |
| XM_028215194 | 95.726 | 351 | 4.14e-154 |