Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB013158 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB013158 |
KEGG Orthology
K05939 K16099 K12240 K18688 K15656 K22149 K15661 K16876 K15665 K01896 K14760 K15664 K15666 K16123 K04787 K16375 K14469 K16101 K16432 K21792 K16120 K22152 K15660 K15394 K22739 K04788 K08295 K15655 K04784 K15668 K02364 K12425 K16098 K23665 K16228 K00155 K15659 K12421 K15662 K22118 K15653 K16131 K18660 K12424 K16122 K16126 K16428 K10526 K01904 K01897 K24101 K04792 K16130 K04783 K01895 K16229 K14467 K20034 K01911 K19102 K23667 K15868 K18662 K04780 K04105 K02363 K22133 K05914 K23617 K15658 K03822 K12442 K18000 K16093 K15654 K22319 K01043 K16129 K12427 K03367 K21059 K04789 K12238 K15667 K15670 K16095 K00666 K12743 K15384 K12507 K02182 K18661 K04116 K18687 K19103 K22148 K12237 K15395 K15018 K16416 K16124 K12239 K16391 K13611 K15663 K16094 K16430 K16121 K16378 K16119 K12444 K12701 K12709 K15675
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | GWHACFB00000003 |
| Cds Coordinates: | 12192936-12202285 |
| Nucleotide length: | 9349 |
| Prodicted protein length: | 543 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR020845 | ProSitePatterns | 187 | 198 | AMP-binding, conserved site |
| IPR025110 | Pfam | 452 | 527 | AMP-binding enzyme, C-terminal domain |
| IPR000873 | Pfam | 33 | 443 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 1 | 437 | AMP-dependent synthetase-like superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615680 | 99.755 | 1632 | 0.0 |
| XM_028222930 | 99.571 | 1632 | 0.0 |