Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB013913 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB013913 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHACFB00000003 |
| Cds Coordinates: | 108900390-108901089 |
| Nucleotide length: | 699 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR014746 | SUPERFAMILY | 18 | 121 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR008146 | SMART | 17 | 188 | Glutamine synthetase, catalytic domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028250814 | 100 | 325 | 1.72e-167 |
| XM_028204810 | 100 | 325 | 1.72e-167 |
| MG778703 | 99.057 | 318 | 1.35e-158 |
| XM_028270852 | 98.742 | 318 | 6.28e-157 |
| KY649469 | 98.742 | 318 | 6.28e-157 |
| JN226569 | 98.742 | 318 | 6.28e-157 |
| AB115183 | 98.742 | 318 | 6.28e-157 |
| JQ925873 | 98.428 | 318 | 2.92e-155 |
| JN602373 | 98.366 | 306 | 1.37e-148 |
| AB085606 | 98.519 | 270 | 3.02e-130 |
| XR_003641376 | 97.931 | 145 | 2.00e-62 |
| XR_003641375 | 97.931 | 145 | 2.00e-62 |
| XR_003641374 | 97.931 | 145 | 2.00e-62 |
| XM_028241326 | 97.931 | 145 | 2.00e-62 |
| XM_028211981 | 100 | 63 | 7.60e-22 |
| XM_028265318 | 100 | 63 | 7.60e-22 |
| XM_028212849 | 100 | 43 | 9.97e-11 |