Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB014373 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB014373 |
Gene Family
Gln-synt_C,Gln-synt_N
Gene Attributes
| Chromosome: | GWHACFB00000003 |
| Cds Coordinates: | 134209264-134212560 |
| Nucleotide length: | 3296 |
| Prodicted protein length: | 331 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR008147 | Pfam | 27 | 72 | Glutamine synthetase, beta-Grasp domain |
| IPR008146 | SMART | 78 | 326 | Glutamine synthetase, catalytic domain |
| IPR027303 | ProSitePatterns | 212 | 228 | Glutamine synthetase, glycine-rich site |
| IPR036651 | Gene3D | 1 | 78 | Glutamine synthetase, N-terminal domain superfamily |
| IPR008146 | Pfam | 82 | 324 | Glutamine synthetase, catalytic domain |
| IPR036651 | SUPERFAMILY | 5 | 77 | Glutamine synthetase, N-terminal domain superfamily |
| IPR027302 | ProSitePatterns | 30 | 47 | Glutamine synthetase, N-terminal conserved site |
| IPR014746 | SUPERFAMILY | 78 | 328 | Glutamine synthetase/guanido kinase, catalytic domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MG778705 | 99.799 | 996 | 0.0 |
| KY649470 | 99.799 | 996 | 0.0 |
| GU462131 | 99.799 | 996 | 0.0 |
| AB115184 | 99.799 | 996 | 0.0 |
| XM_028256209 | 99.699 | 996 | 0.0 |
| EU284131 | 99.699 | 996 | 0.0 |
| EF055882 | 99.498 | 996 | 0.0 |
| XR_003642679 | 96.842 | 190 | 3.50e-82 |
| XR_003642678 | 96.842 | 190 | 3.50e-82 |
| XR_003642677 | 96.842 | 190 | 3.50e-82 |
| XR_003642676 | 96.842 | 190 | 3.50e-82 |
| XM_028245405 | 96.842 | 190 | 3.50e-82 |
| AB597267 | 100 | 154 | 3.55e-72 |
| AB597267 | 98.529 | 68 | 1.06e-22 |
| AB597266 | 100 | 154 | 3.55e-72 |
| AB597266 | 98.529 | 68 | 1.06e-22 |
| AB597265 | 100 | 154 | 3.55e-72 |
| AB597265 | 98.529 | 68 | 1.06e-22 |
| AB597264 | 100 | 154 | 3.55e-72 |
| AB597264 | 97.059 | 68 | 4.93e-21 |
| AB597268 | 98.701 | 154 | 7.68e-69 |
| AB597268 | 98.529 | 68 | 1.06e-22 |