Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB015399 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB015399 |
Gene Family
Epimerase,NAD_binding_4,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_10,NmrA
Gene Attributes
| Chromosome: | GWHACFB00000004 |
| Cds Coordinates: | 12001576-12003930 |
| Nucleotide length: | 2354 |
| Prodicted protein length: | 344 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 15 | 260 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 11 | 322 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028243762 | 99.514 | 1029 | 0.0 |
| KY615692 | 98.251 | 1029 | 0.0 |
| XM_028243763 | 99.807 | 517 | 0.0 |
| XM_028243763 | 98.684 | 304 | 7.14e-149 |