Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB015400 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB015400 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,NAD_binding_4,GDP_Man_Dehyd,NmrA,Polysacc_synt_2
Gene Attributes
| Chromosome: | GWHACFB00000004 |
| Cds Coordinates: | 12005840-12035463 |
| Nucleotide length: | 29623 |
| Prodicted protein length: | 361 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 35 | 277 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 31 | 340 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028243764 | 99.811 | 1061 | 0.0 |
| KY615693 | 99.508 | 1017 | 0.0 |