Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB015588 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB015588 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHACFB00000004 |
| Cds Coordinates: | 23061811-23063995 |
| Nucleotide length: | 2184 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR043594 | PANTHER | 150 | 193 | HMG-CoA lyase |
| IPR013785 | Gene3D | 148 | 194 | Aldolase-type TIM barrel |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028268334 | 100 | 319 | 3.91e-164 |
| XM_028268334 | 98.726 | 157 | 9.62e-71 |
| XM_028268332 | 100 | 319 | 3.91e-164 |
| XM_028268332 | 98.726 | 157 | 9.62e-71 |
| XM_028268331 | 100 | 319 | 3.91e-164 |
| XM_028268331 | 98.726 | 157 | 9.62e-71 |
| XM_028268333 | 100 | 238 | 4.17e-119 |
| XM_028268333 | 98.726 | 157 | 9.62e-71 |
| XM_028268333 | 100 | 82 | 2.19e-32 |
| XM_028268339 | 100 | 168 | 3.41e-80 |
| XM_028268339 | 98.726 | 157 | 9.62e-71 |
| XM_028268339 | 100 | 70 | 1.03e-25 |
| XM_028268338 | 100 | 168 | 3.41e-80 |
| XM_028268338 | 98.726 | 157 | 9.62e-71 |
| XM_028268338 | 100 | 82 | 2.19e-32 |
| XM_028268338 | 100 | 70 | 1.03e-25 |
| XM_028268337 | 100 | 168 | 3.41e-80 |
| XM_028268337 | 98.726 | 157 | 9.62e-71 |
| XM_028268337 | 100 | 70 | 1.03e-25 |
| XM_028268336 | 100 | 168 | 3.41e-80 |
| XM_028268336 | 98.726 | 157 | 9.62e-71 |
| XM_028268336 | 100 | 82 | 2.19e-32 |
| XM_028268336 | 100 | 70 | 1.03e-25 |
| XM_028268335 | 100 | 168 | 3.41e-80 |
| XM_028268335 | 98.726 | 157 | 9.62e-71 |
| XM_028268335 | 100 | 82 | 2.19e-32 |
| XM_028268335 | 100 | 70 | 1.03e-25 |
| XM_028213034 | 95.833 | 168 | 1.61e-68 |
| XM_028213034 | 97.143 | 70 | 2.22e-22 |
| XM_028213034 | 100 | 42 | 3.77e-10 |
| XM_028213033 | 95.833 | 168 | 1.61e-68 |
| XM_028213033 | 97.222 | 72 | 1.72e-23 |
| XM_028213033 | 100 | 42 | 3.77e-10 |
| XM_028213032 | 95.833 | 168 | 1.61e-68 |
| XM_028213032 | 97.143 | 70 | 2.22e-22 |
| XM_028213032 | 100 | 42 | 3.77e-10 |
| XM_028213031 | 95.833 | 168 | 1.61e-68 |
| XM_028213031 | 97.143 | 70 | 2.22e-22 |
| XM_028213031 | 100 | 42 | 3.77e-10 |
| XM_028213030 | 95.833 | 168 | 1.61e-68 |
| XM_028213030 | 97.222 | 72 | 1.72e-23 |
| XM_028213030 | 100 | 42 | 3.77e-10 |
| XM_028213029 | 95.833 | 168 | 1.61e-68 |
| XM_028213029 | 97.222 | 72 | 1.72e-23 |
| XM_028213029 | 100 | 42 | 3.77e-10 |
| XM_028213028 | 95.833 | 168 | 1.61e-68 |
| XM_028213028 | 97.222 | 72 | 1.72e-23 |
| XM_028213028 | 100 | 42 | 3.77e-10 |
| AB297451 | 98.78 | 82 | 1.02e-30 |
| AB362886 | 98.75 | 80 | 1.32e-29 |
| MN163830 | 97.561 | 82 | 4.74e-29 |
| XM_028209955 | 97.561 | 82 | 4.74e-29 |
| XM_028256070 | 97.561 | 82 | 4.74e-29 |
| XM_028256069 | 97.561 | 82 | 4.74e-29 |
| XM_028205684 | 97.561 | 82 | 4.74e-29 |
| JX647693 | 97.561 | 82 | 4.74e-29 |
| JX647691 | 97.561 | 82 | 4.74e-29 |
| AB362882 | 97.561 | 82 | 4.74e-29 |
| AB207817 | 97.561 | 82 | 4.74e-29 |
| AB207816 | 97.561 | 82 | 4.74e-29 |
| AB056108 | 97.561 | 82 | 4.74e-29 |
| AB031281 | 97.561 | 82 | 4.74e-29 |
| XM_028268989 | 96.341 | 82 | 2.20e-27 |
| XM_028205740 | 96.341 | 82 | 2.20e-27 |
| XM_028205701 | 96.341 | 82 | 2.20e-27 |
| JX647694 | 96.341 | 82 | 2.20e-27 |
| JX647692 | 96.341 | 82 | 2.20e-27 |
| AB207818 | 96.341 | 82 | 2.20e-27 |
| AY907710 | 96.341 | 82 | 2.20e-27 |
| AB362885 | 95.122 | 82 | 1.03e-25 |
| AB362884 | 95.122 | 82 | 1.03e-25 |
| AB362883 | 95.122 | 82 | 1.03e-25 |