Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB019343 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB019343 |
Gene Family
Orn_Arg_deC_N
Gene Attributes
| Chromosome: | GWHACFB00000006 |
| Cds Coordinates: | 10187692-10190148 |
| Nucleotide length: | 2456 |
| Prodicted protein length: | 735 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002985 | PRINTS | 215 | 230 | Arginine decarboxylase |
| IPR002985 | PRINTS | 598 | 619 | Arginine decarboxylase |
| IPR002985 | PRINTS | 241 | 262 | Arginine decarboxylase |
| IPR002985 | PRINTS | 157 | 171 | Arginine decarboxylase |
| IPR002985 | PRINTS | 393 | 410 | Arginine decarboxylase |
| IPR002985 | PRINTS | 133 | 148 | Arginine decarboxylase |
| IPR002985 | PRINTS | 519 | 540 | Arginine decarboxylase |
| IPR002985 | PRINTS | 544 | 569 | Arginine decarboxylase |
| IPR002985 | PRINTS | 265 | 287 | Arginine decarboxylase |
| IPR002985 | CDD | 124 | 619 | Arginine decarboxylase |
| IPR029066 | Gene3D | 134 | 415 | PLP-binding barrel |
| IPR009006 | SUPERFAMILY | 509 | 623 | Alanine racemase/group IV decarboxylase, C-terminal |
| IPR022644 | Pfam | 158 | 413 | Orn/DAP/Arg decarboxylase 2, N-terminal |
| IPR000183 | PRINTS | 189 | 201 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 403 | 422 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 308 | 321 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 165 | 183 | Ornithine/DAP/Arg decarboxylase |
| IPR000183 | PRINTS | 598 | 611 | Ornithine/DAP/Arg decarboxylase |
| IPR022653 | ProSitePatterns | 165 | 183 | Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site |
| IPR022657 | ProSitePatterns | 346 | 359 | Orn/DAP/Arg decarboxylase 2, conserved site |
| IPR002985 | TIGRFAM | 64 | 691 | Arginine decarboxylase |
| IPR002985 | PIRSF | 53 | 694 | Arginine decarboxylase |
| IPR009006 | Gene3D | 72 | 622 | Alanine racemase/group IV decarboxylase, C-terminal |
| IPR002985 | PANTHER | 16 | 735 | Arginine decarboxylase |
| IPR029066 | SUPERFAMILY | 134 | 415 | PLP-binding barrel |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| JQ653274 | 99.954 | 2175 | 0.0 |
| XM_028266866 | 99.632 | 2175 | 0.0 |