Data Related Infomation

Camellia sinensis var. sinensis cv. Longjing43                  

Data Related Infomation

Camellia sinensis var. sinensis cv. Longjing43                  GWHPACFB019717                   TRI CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPACFB019717

KEGG Orthology

K16233  K13232  K00660  K13234  K16167  K17212  K21386  K21385  K12644  K20503  K17211  K13233  K21384  K13231  

Gene Family

Chal_sti_synt_N,Chal_sti_synt_C,ACP_syn_III,FAE1_CUT1_RppA

Gene Attributes

Chromosome:GWHACFB00000006
Cds Coordinates:50921084-50928148
Nucleotide length:7064
Prodicted protein length:389

Gene Ontology Classification

Database Annotation Match Start Match End GO
NullNullNullNullNull

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR016039Gene3D236389Thiolase-like
IPR016039SUPERFAMILY235386Thiolase-like
IPR001099Pfam5227Chalcone/stilbene synthase, N-terminal
IPR012328Pfam238387Chalcone/stilbene synthase, C-terminal
IPR011141PANTHER2388Polyketide synthase, type III
IPR011141PIRSF2389Polyketide synthase, type III
IPR016039Gene3D1235Thiolase-like
IPR016039SUPERFAMILY1231Thiolase-like

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02827048899.0611700.0
XM_02823759696.2598820.0
AY14670096.6457750.0
AY14670795.8717750.0
                  TRI CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPACFB019717

KEGG Orthology

K00660,K13232,K12644,K13234,K13231,K21384,K13233,K17211,K20503,K21385,K21386,K17212,K16167,K16233

Gene Family

Chal_sti_synt_N,Chal_sti_synt_C,ACP_syn_III,FAE1_CUT1_RppA

Gene Attributes

Chromosome:GWHACFB00000006
Cds Coordinates:50921084-50928148
Nucleotide length:7064
Prodicted protein length:389

Gene Ontology Classification

No Gene Ontology Found

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End E-value
NullNullNullNullNull

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02827048899.0611700.0