Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB021129 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB021129 |
Gene Family
NmrA,NAD_binding_10,Epimerase
Gene Attributes
| Chromosome: | GWHACFB00000006 |
| Cds Coordinates: | 156752128-156759820 |
| Nucleotide length: | 7692 |
| Prodicted protein length: | 339 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR008030 | Pfam | 14 | 237 | NmrA-like domain |
| IPR036291 | SUPERFAMILY | 14 | 251 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028207864 | 99.028 | 1029 | 0.0 |
| KF879516 | 98.834 | 1029 | 0.0 |
| EF205148 | 98.834 | 1029 | 0.0 |
| KY615698 | 98.542 | 1029 | 0.0 |
| GU992401 | 98.542 | 1029 | 0.0 |
| MH236746 | 97.959 | 1029 | 0.0 |
| KR045740 | 96.501 | 1029 | 0.0 |
| CP050231 | 95.745 | 47 | 2.38e-09 |